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  5. MA_10436942g0020

MA_10436942g0020


Description : (at5g60410 : 372.0) Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling; SIZ1; CONTAINS InterPro DOMAIN/s: DNA-binding SAP (InterPro:IPR003034), Zinc finger, MIZ-type (InterPro:IPR004181), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 744.0) & (original description: no original description)


Gene families : OG_42_0001670 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10436942g0020
Cluster HCCA clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
At5g60410 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.03 Orthogroups_2024-Update
Bradi2g38030 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.04 Orthogroups_2024-Update
Brara.J01400.1 No alias E3 SUMO ubiquitin ligase *(SIZ1) 0.03 Orthogroups_2024-Update
Glyma.12G071300 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.03 Orthogroups_2024-Update
Glyma.12G170900 No alias DNA-binding protein with MIZ/SP-RING zinc finger,... 0.03 Orthogroups_2024-Update
HORVU1Hr1G013600.3 No alias E3 SUMO ubiquitin ligase *(SIZ1) 0.04 Orthogroups_2024-Update
Mp6g08590.1 No alias SUMO E3 ligase (SIZ1) 0.02 Orthogroups_2024-Update
PSME_00045294-RA No alias (at5g60410 : 194.0) Encodes a plant small... 0.03 Orthogroups_2024-Update
Pp1s16_412V6 No alias MUF9.5; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Solyc06g010000 No alias SUMO E3 ligase SIZ1 (AHRD V3.3 *** A0A0X9AQ43_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
CC GO:0031011 Ino80 complex IEP Predicted GO
CC GO:0033202 DNA helicase complex IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predicted GO
CC GO:0097346 INO80-type complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004181 Znf_MIZ 140 188
No external refs found!