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  5. MA_10437098g0010

MA_10437098g0010


Description : (at4g11050 : 708.0) glycosyl hydrolase 9C3 (GH9C3); FUNCTIONS IN: carbohydrate binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Carbohydrate-binding (InterPro:IPR008965), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701), Carbohydrate binding domain CBM49 (InterPro:IPR019028); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9C2 (TAIR:AT1G64390.1); Has 1895 Blast hits to 1880 proteins in 271 species: Archae - 2; Bacteria - 695; Metazoa - 181; Fungi - 19; Plants - 923; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). & (q5nat0|gun2_orysa : 652.0) Endoglucanase 2 precursor (EC 3.2.1.4) (Endo-1,4-beta glucanase 2) (OsGLU5) - Oryza sativa (Rice) & (reliability: 1416.0) & (original description: no original description)


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_10437098g0010
Cluster HCCA clusters: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
A4A49_10919 No alias endoglucanase 5 0.03 Orthogroups_2024-Update
At2g44570 No alias Endoglucanase 15 [Source:UniProtKB/Swiss-Prot;Acc:O80497] 0.03 Orthogroups_2024-Update
Bradi3g57190 No alias glycosyl hydrolase 9A4 0.02 Orthogroups_2024-Update
Brara.I03254.1 No alias class-B endo-1,4-beta-glucanase 0.02 Orthogroups_2024-Update
Glyma.10G017000 No alias glycosyl hydrolase 9B13 0.04 Orthogroups_2024-Update
Glyma.11G101300 No alias glycosyl hydrolase 9C1 0.03 Orthogroups_2024-Update
MA_10430095g0010 No alias (at4g39000 : 336.0) glycosyl hydrolase 9B17 (GH9B17);... 0.03 Orthogroups_2024-Update
MA_19509g0020 No alias (at1g64390 : 677.0) glycosyl hydrolase 9C2 (GH9C2);... 0.04 Orthogroups_2024-Update
MA_216572g0010 No alias (at1g02800 : 571.0) Encodes a protein with similarity to... 0.04 Orthogroups_2024-Update
PSME_00016234-RA No alias (at1g70710 : 674.0) endo-1,4-beta-glucanase. Involved in... 0.04 Orthogroups_2024-Update
PSME_00024924-RA No alias (at4g02290 : 664.0) glycosyl hydrolase 9B13 (GH9B13);... 0.03 Orthogroups_2024-Update
PSME_00036149-RA No alias (q652f9|gun17_orysa : 587.0) Endoglucanase 17 precursor... 0.02 Orthogroups_2024-Update
Potri.008G132700 No alias glycosyl hydrolase 9B1 0.03 Orthogroups_2024-Update
Potri.019G069300 No alias cellulase 3 0.03 Orthogroups_2024-Update
Pp1s100_139V6 No alias endo-beta- -glucanase 0.03 Orthogroups_2024-Update
Pp1s37_355V6 No alias endo-beta- -glucanase 0.02 Orthogroups_2024-Update
Sobic.002G193600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G042700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen08g030520 No alias Glycosyl hydrolase family 9 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
MF GO:0030246 carbohydrate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 24 458
IPR019028 CBM_49 517 596
No external refs found!