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  5. MA_104614g0010

MA_104614g0010


Description : (at5g12030 : 130.0) Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.; heat shock protein 17.6A (HSP17.6A); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding, response to high light intensity, response to hydrogen peroxide, response to heat, hyperosmotic response; LOCATED IN: cytosol; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: 17.6 kDa class II heat shock protein (TAIR:AT5G12020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p19242|hsp21_pea : 129.0) 17.1 kDa class II heat shock protein - Pisum sativum (Garden pea) & (reliability: 260.0) & (original description: no original description)


Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_104614g0010
Cluster HCCA clusters: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G083810 No alias 17.6 kDa class II heat shock protein 0.02 Orthogroups_2024-Update
GRMZM2G098167 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G175700 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
PSME_00006740-RA No alias (at3g51680 : 165.0) NAD(P)-binding Rossmann-fold... 0.05 Orthogroups_2024-Update
PSME_00016584-RA No alias (p19242|hsp21_pea : 152.0) 17.1 kDa class II heat shock... 0.04 Orthogroups_2024-Update
PSME_00026772-RA No alias (at5g59720 : 211.0) encodes a low molecular weight heat... 0.04 Orthogroups_2024-Update
PSME_00037343-RA No alias (at5g59720 : 217.0) encodes a low molecular weight heat... 0.06 Orthogroups_2024-Update
PSME_00037344-RA No alias (at5g59720 : 217.0) encodes a low molecular weight heat... 0.04 Orthogroups_2024-Update
PSME_00051906-RA No alias (p19243|hsp11_pea : 161.0) 18.1 kDa class I heat shock... 0.12 Orthogroups_2024-Update
Potri.011G001600 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Potri.019G081200 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Sobic.003G082500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G086400.1 No alias class-ER small heat-shock-responsive protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 42 145
No external refs found!