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Description : (at2g17140 : 357.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G65560.1); Has 62164 Blast hits to 14567 proteins in 313 species: Archae - 6; Bacteria - 60; Metazoa - 703; Fungi - 1051; Plants - 58243; Viruses - 0; Other Eukaryotes - 2101 (source: NCBI BLink). & (q76c99|rf1_orysa : 326.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 654.0) & (original description: no original description)
Gene families : OG_42_0009274 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009274_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_104741g0010 | |
| Cluster | HCCA clusters: Cluster_83 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004527 | exonuclease activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015693 | magnesium ion transport | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| BP | GO:0070838 | divalent metal ion transport | IEP | Predicted GO |
| BP | GO:0072511 | divalent inorganic cation transport | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 328 | 360 |
| IPR002885 | Pentatricopeptide_repeat | 152 | 184 |
| IPR002885 | Pentatricopeptide_repeat | 363 | 394 |
| IPR002885 | Pentatricopeptide_repeat | 20 | 48 |
| IPR002885 | Pentatricopeptide_repeat | 56 | 84 |
| IPR002885 | Pentatricopeptide_repeat | 86 | 135 |
| IPR002885 | Pentatricopeptide_repeat | 579 | 623 |
| IPR002885 | Pentatricopeptide_repeat | 261 | 309 |
| IPR002885 | Pentatricopeptide_repeat | 402 | 450 |
| IPR002885 | Pentatricopeptide_repeat | 471 | 520 |
| IPR002885 | Pentatricopeptide_repeat | 191 | 240 |
| No external refs found! |