1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_105065g0010

MA_105065g0010


Description : (at1g24620 : 123.0) EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: response to cold; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT1G18210.2); Has 28159 Blast hits to 18576 proteins in 1591 species: Archae - 2; Bacteria - 225; Metazoa - 10723; Fungi - 6999; Plants - 5954; Viruses - 2; Other Eukaryotes - 4254 (source: NCBI BLink). & (p04352|calm_chlre : 92.8) Calmodulin (CaM) - Chlamydomonas reinhardtii & (reliability: 246.0) & (original description: no original description)


Gene families : OG_42_0000644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_105065g0010
Cluster HCCA clusters: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G215800 No alias Calcium-binding EF-hand family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G057410.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
MA_616616g0010 No alias (at1g24620 : 118.0) EF hand calcium-binding protein... 0.03 Orthogroups_2024-Update
PSME_00056813-RA No alias (at1g24620 : 134.0) EF hand calcium-binding protein... 0.05 Orthogroups_2024-Update
Pp1s107_173V6 No alias polcalcin jun o 2 0.02 Orthogroups_2024-Update
Sobic.009G083600.1 No alias calcium sensor *(CML) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 161 189
IPR002048 EF_hand_dom 87 146
No external refs found!