Description : (at2g27610 : 599.0) Tetratricopeptide repeat (TPR)-like superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G13650.1); Has 54594 Blast hits to 14874 proteins in 305 species: Archae - 2; Bacteria - 30; Metazoa - 158; Fungi - 263; Plants - 53396; Viruses - 0; Other Eukaryotes - 745 (source: NCBI BLink). & (q76c99|rf1_orysa : 159.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1198.0) & (original description: no original description)
Gene families : OG_42_0012092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0012092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_105735g0010 | |
Cluster | HCCA clusters: Cluster_25 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
MF | GO:0005507 | copper ion binding | IEP | Predicted GO |
CC | GO:0005576 | extracellular region | IEP | Predicted GO |
CC | GO:0005618 | cell wall | IEP | Predicted GO |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0006073 | cellular glucan metabolic process | IEP | Predicted GO |
MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015696 | ammonium transport | IEP | Predicted GO |
MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Predicted GO |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
CC | GO:0030312 | external encapsulating structure | IEP | Predicted GO |
BP | GO:0044042 | glucan metabolic process | IEP | Predicted GO |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Predicted GO |
CC | GO:0048046 | apoplast | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032867 | DYW_dom | 642 | 766 |
IPR002885 | Pentatricopeptide_repeat | 107 | 154 |
IPR002885 | Pentatricopeptide_repeat | 306 | 338 |
IPR002885 | Pentatricopeptide_repeat | 368 | 415 |
IPR002885 | Pentatricopeptide_repeat | 208 | 250 |
IPR002885 | Pentatricopeptide_repeat | 469 | 517 |
IPR002885 | Pentatricopeptide_repeat | 543 | 567 |
IPR002885 | Pentatricopeptide_repeat | 280 | 305 |
No external refs found! |