MA_108366g0010

Description : (at4g35730 : 167.0) Regulator of Vps4 activity in the MVB pathway protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061); BEST Arabidopsis thaliana protein match is: Regulator of Vps4 activity in the MVB pathway protein (TAIR:AT1G34220.2); Has 794 Blast hits to 754 proteins in 186 species: Archae - 0; Bacteria - 4; Metazoa - 200; Fungi - 205; Plants - 312; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). & (reliability: 334.0) & (original description: no original description)

Gene families : OG_42_0000752 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000752_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Picea release: MA_108366g0010
Cluster	HCCA clusters: Cluster_148

Target	Alias	Description	ECC score	Gene Family Method
At1g34220	No alias	Regulator of Vps4 activity in the MVB pathway protein...	0.03	Orthogroups_2024-Update
Kfl00078_0060	kfl00078_0060_v1.1	(at1g34220 : 227.0) Regulator of Vps4 activity in the...	0.02	Orthogroups_2024-Update
Kfl00756_0040	kfl00756_0040_v1.1	(at1g34220 : 161.0) Regulator of Vps4 activity in the...	0.02	Orthogroups_2024-Update
evm.model.contig_2068.10	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
evm.model.tig00000227.28	No alias	(at1g34220 : 96.7) Regulator of Vps4 activity in the MVB...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	IEA	InterProScan predictions
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005096	GTPase activator activity	IEP	Predicted GO
BP	GO:0006284	base-excision repair	IEP	Predicted GO
BP	GO:0006338	chromatin remodeling	IEP	Predicted GO
MF	GO:0008047	enzyme activator activity	IEP	Predicted GO
MF	GO:0030695	GTPase regulator activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005061	Ist1	48	170

External Links

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MA_108366g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation