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Description : "(at1g56170 : 189.0) Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5B) and expressed in vegetative and reproductive tissues; ""nuclear factor Y, subunit C2"" (NF-YC2); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C9 (TAIR:AT1G08970.2); Has 1485 Blast hits to 1485 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 583; Fungi - 338; Plants - 429; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink). & (reliability: 378.0) & (original description: no original description)"
Gene families : OG_42_0000527 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000527_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_11029g0010 | |
| Cluster | HCCA clusters: Cluster_289 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Brara.F00567.1 | No alias | component *(NF-YC) of NF-Y transcription factor complex | 0.03 | Orthogroups_2024-Update | |
| MA_10163039g0010 | No alias | "(at5g63470 : 161.0) ""nuclear factor Y, subunit C4""... | 0.03 | Orthogroups_2024-Update | |
| PSME_00007097-RA | No alias | "(at1g56170 : 141.0) Encodes a protein with similarity... | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Predicted GO |
| CC | GO:0009522 | photosystem I | IEP | Predicted GO |
| CC | GO:0009579 | thylakoid | IEP | Predicted GO |
| BP | GO:0015696 | ammonium transport | IEP | Predicted GO |
| MF | GO:0046983 | protein dimerization activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003958 | CBFA_NFYB_domain | 100 | 163 |
| No external refs found! |