Description : (at4g12420 : 830.0) Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues.; SKU5; FUNCTIONS IN: oxidoreductase activity, copper ion binding; INVOLVED IN: cell tip growth; LOCATED IN: plasma membrane, anchored to membrane, plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, type 2 (InterPro:IPR011706), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: SKU5 similar 2 (TAIR:AT5G51480.1). & (q00624|aso_brana : 534.0) L-ascorbate oxidase homolog precursor (EC 1.10.3.3) (Ascorbase) - Brassica napus (Rape) & (reliability: 1660.0) & (original description: no original description)
Gene families : OG_42_0001738 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001738_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_110832g0010 | |
Cluster | HCCA clusters: Cluster_87 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi1g52200 | No alias | Cupredoxin superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.J00704.1 | No alias | EC_1.10 oxidoreductase acting on diphenol or related... | 0.04 | Orthogroups_2024-Update | |
LOC_Os08g05820 | No alias | monocopper oxidase, putative, expressed | 0.03 | Orthogroups_2024-Update | |
Potri.001G120300 | No alias | Cupredoxin superfamily protein | 0.04 | Orthogroups_2024-Update | |
Seita.9G197500.1 | No alias | EC_1.10 oxidoreductase acting on diphenol or related... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005507 | copper ion binding | IEA | InterProScan predictions |
MF | GO:0016491 | oxidoreductase activity | IEA | InterProScan predictions |
BP | GO:0055114 | oxidation-reduction process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Predicted GO |
MF | GO:0004867 | serine-type endopeptidase inhibitor activity | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
BP | GO:0006359 | regulation of transcription by RNA polymerase III | IEP | Predicted GO |
BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Predicted GO |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
BP | GO:0016480 | negative regulation of transcription by RNA polymerase III | IEP | Predicted GO |
MF | GO:0030414 | peptidase inhibitor activity | IEP | Predicted GO |
BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Predicted GO |
BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0045892 | negative regulation of transcription, DNA-templated | IEP | Predicted GO |
BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0048523 | negative regulation of cellular process | IEP | Predicted GO |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Predicted GO |
BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | Predicted GO |
MF | GO:0061134 | peptidase regulator activity | IEP | Predicted GO |
MF | GO:0061135 | endopeptidase regulator activity | IEP | Predicted GO |
BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | Predicted GO |
BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | Predicted GO |
BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
No external refs found! |