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  5. MA_12361g0010

MA_12361g0010


Description : (at1g10390 : 282.0) Nucleoporin autopeptidase; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: chloroplast, nuclear pore; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S59, nucleoporin (InterPro:IPR007230); BEST Arabidopsis thaliana protein match is: Nucleoporin autopeptidase (TAIR:AT1G59660.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 564.0) & (original description: no original description)


Gene families : OG_42_0001108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_12361g0010
Cluster HCCA clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g07580 No alias OsNucAP1 - Putative Nucleoporin Autopeptidase homologue,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA InterProScan predictions
BP GO:0006913 nucleocytoplasmic transport IEA InterProScan predictions
MF GO:0017056 structural constituent of nuclear pore IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007230 Peptidase_S59 178 323
No external refs found!