MA_124178g0010

Description : (p35684|rl3_orysj : 658.0) 60S ribosomal protein L3 OS=Oryza sativa subsp. japonica GN=RPL3 PE=2 SV=2 & (at1g61580 : 644.0) R-protein L3 B (RPL3B); FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L3 (InterPro:IPR000597), Ribosomal protein L3, conserved site (InterPro:IPR019926), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: ribosomal protein 1 (TAIR:AT1G43170.8); Has 2774 Blast hits to 2767 proteins in 966 species: Archae - 329; Bacteria - 1185; Metazoa - 455; Fungi - 168; Plants - 207; Viruses - 1; Other Eukaryotes - 429 (source: NCBI BLink). & (reliability: 1288.0) & (original description: no original description)

Gene families : OG_42_0002422 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002422_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Picea release: MA_124178g0010
Cluster	HCCA clusters: Cluster_166

Target	Alias	Description	ECC score	Gene Family Method
270706	No alias	ribosomal protein 1	0.02	Orthogroups_2024-Update
Bradi4g24610	No alias	ribosomal protein 1	0.03	Orthogroups_2024-Update
Bradi4g41680	No alias	ribosomal protein 1	0.02	Orthogroups_2024-Update
Brara.B02465.1	No alias	component *(uL3) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Brara.I01735.1	No alias	component *(uL3) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
GRMZM2G109677	No alias	ribosomal protein 1	0.04	Orthogroups_2024-Update
HORVU4Hr1G019980.1	No alias	component *(uL3) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Kfl01033_0020	kfl01033_0020_v1.1	(at1g61580 : 584.0) R-protein L3 B (RPL3B); FUNCTIONS...	0.02	Orthogroups_2024-Update
Mp1g18990.1	No alias	component RPL3 of LSU proteome component	0.03	Orthogroups_2024-Update
Potri.005G194500	No alias	ribosomal protein 1	0.03	Orthogroups_2024-Update
Pp1s330_36V6	No alias	ribosomal protein l3	0.05	Orthogroups_2024-Update
Seita.7G290900.1	No alias	component *(uL3) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Seita.8G046000.1	No alias	component *(uL3) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Sobic.005G050500.1	No alias	component *(uL3) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
Sobic.006G216600.1	No alias	component *(uL3) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Solyc01g104590	No alias	ribosomal protein L3	0.07	Orthogroups_2024-Update
Sopen01g047100	No alias	Ribosomal protein L3	0.07	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
BP	GO:0006308	DNA catabolic process	IEP	Predicted GO
BP	GO:0006887	exocytosis	IEP	Predicted GO
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predicted GO
BP	GO:0019439	aromatic compound catabolic process	IEP	Predicted GO
BP	GO:0032940	secretion by cell	IEP	Predicted GO
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Predicted GO
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Predicted GO
CC	GO:0044448	cell cortex part	IEP	Predicted GO
BP	GO:0046700	heterocycle catabolic process	IEP	Predicted GO
BP	GO:0046903	secretion	IEP	Predicted GO
CC	GO:0099023	tethering complex	IEP	Predicted GO
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000597	Ribosomal_L3	1	370

External Links

No external refs found!

MA_124178g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation