1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_124221g0010

MA_124221g0010


Description : (at3g22470 : 333.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G12300.1); Has 71386 Blast hits to 15586 proteins in 313 species: Archae - 4; Bacteria - 76; Metazoa - 1075; Fungi - 1368; Plants - 66381; Viruses - 0; Other Eukaryotes - 2482 (source: NCBI BLink). & (q76c99|rf1_orysa : 293.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 630.0) & (original description: no original description)


Gene families : OG_42_0001385 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001385_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_124221g0010
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
PSME_00017725-RA No alias (at3g22470 : 347.0) Pentatricopeptide repeat (PPR)... 0.05 Orthogroups_2024-Update
PSME_00040761-RA No alias (at5g39710 : 341.0) EMBRYO DEFECTIVE 2745 (EMB2745);... 0.05 Orthogroups_2024-Update
PSME_00055403-RA No alias (at3g22470 : 280.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 416 464
IPR002885 Pentatricopeptide_repeat 310 359
IPR002885 Pentatricopeptide_repeat 485 522
IPR002885 Pentatricopeptide_repeat 240 289
IPR002885 Pentatricopeptide_repeat 135 184
IPR002885 Pentatricopeptide_repeat 68 97
IPR002885 Pentatricopeptide_repeat 378 408
IPR002885 Pentatricopeptide_repeat 201 230
IPR002885 Pentatricopeptide_repeat 98 129
No external refs found!