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Description : (at5g07040 : 116.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G53110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 232.0) & (original description: no original description)
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_125507g0010 | |
| Cluster | HCCA clusters: Cluster_104 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g20823 | No alias | RING-H2 finger protein ATL80... | 0.03 | Orthogroups_2024-Update | |
| Bradi3g32215 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| LOC_Os02g35329 | No alias | RING-H2 finger protein ATL3F, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os05g40020 | No alias | RING-H2 finger protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os09g38110 | No alias | RING-H2 finger protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os11g39640 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| PSME_00010570-RA | No alias | (at4g10150 : 105.0) RING/U-box superfamily protein;... | 0.05 | Orthogroups_2024-Update | |
| Potri.007G064400 | No alias | RING-H2 finger A3A | 0.02 | Orthogroups_2024-Update | |
| Seita.1G004900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006631 | fatty acid metabolic process | IEP | Predicted GO |
| MF | GO:0010181 | FMN binding | IEP | Predicted GO |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
| MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 102 | 143 |
| No external refs found! |