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  5. MA_125741g0010

MA_125741g0010


Description : (at5g16420 : 467.0) Pentatricopeptide repeat (PPR-like) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G53700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q76c99|rf1_orysa : 215.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 934.0) & (original description: no original description)


Gene families : OG_42_0008738 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008738_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_125741g0010
Cluster HCCA clusters: Cluster_71


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 194 242
IPR002885 Pentatricopeptide_repeat 302 348
IPR002885 Pentatricopeptide_repeat 403 452
IPR002885 Pentatricopeptide_repeat 113 172
IPR002885 Pentatricopeptide_repeat 365 397
IPR002885 Pentatricopeptide_repeat 261 293
No external refs found!