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  5. MA_126765g0010

MA_126765g0010


Description : (at1g10650 : 253.0) SBP (S-ribonuclease binding protein) family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), S-ribonuclease binding protein, SBP1, pollen (InterPro:IPR017066); BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT1G60610.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 506.0) & (original description: no original description)


Gene families : OG_42_0000224 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000224_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_126765g0010
Cluster HCCA clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Bradi4g16950 No alias S-ribonuclease binding protein 1 0.03 Orthogroups_2024-Update
Brara.C04565.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.F03573.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I01873.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G057262 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
Glyma.01G203300 No alias SBP (S-ribonuclease binding protein) family protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G100520.1 No alias E3 ubiquitin ligase *(BRG) 0.04 Orthogroups_2024-Update
Potri.012G082200 No alias SBP (S-ribonuclease binding protein) family protein 0.04 Orthogroups_2024-Update
Sobic.005G142300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc04g011950 No alias LOW QUALITY:SBP (S-ribonuclease-binding protein) family... 0.04 Orthogroups_2024-Update
Sopen08g026050 No alias Zinc finger, C3HC4 type (RING finger) 0.02 Orthogroups_2024-Update
evm.model.tig00000949.39 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0004150 dihydroneopterin aldolase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!