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  5. MA_128433g0010

MA_128433g0010


Description : (at4g02750 : 639.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 134.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1278.0) & (original description: no original description)


Gene families : OG_42_0021569 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_128433g0010
Cluster HCCA clusters: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G077700 No alias mitochondrial editing factor 9 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 384 433
IPR002885 Pentatricopeptide_repeat 486 533
IPR032867 DYW_dom 660 714
IPR002885 Pentatricopeptide_repeat 202 231
IPR002885 Pentatricopeptide_repeat 295 324
IPR002885 Pentatricopeptide_repeat 232 261
IPR002885 Pentatricopeptide_repeat 78 107
IPR002885 Pentatricopeptide_repeat 108 138
IPR002885 Pentatricopeptide_repeat 460 483
IPR002885 Pentatricopeptide_repeat 264 293
IPR002885 Pentatricopeptide_repeat 139 168
IPR002885 Pentatricopeptide_repeat 325 354
IPR002885 Pentatricopeptide_repeat 561 584
IPR002885 Pentatricopeptide_repeat 170 199
No external refs found!