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  5. MA_128999g0010

MA_128999g0010


Description : (at5g19160 : 318.0) Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).; TRICHOME BIREFRINGENCE-LIKE 11 (TBL11); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT3G06080.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 636.0) & (original description: no original description)


Gene families : OG_42_0000293 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_128999g0010
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
A4A49_06264 No alias protein trichome birefringence 0.03 Orthogroups_2024-Update
A4A49_15386 No alias protein trichome birefringence 0.04 Orthogroups_2024-Update
At3g06080 No alias Protein trichome birefringence-like 10... 0.04 Orthogroups_2024-Update
Bradi4g42860 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.01 Orthogroups_2024-Update
Brara.A03370.1 No alias polysaccharide O-acetyltransferase *(TBR) 0.03 Orthogroups_2024-Update
Brara.C03373.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E02920.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I04311.1 No alias polysaccharide O-acetyltransferase *(TBR) 0.03 Orthogroups_2024-Update
Glyma.09G109600 No alias Plant protein of unknown function (DUF828) 0.04 Orthogroups_2024-Update
HORVU1Hr1G007630.1 No alias rhamnogalacturonan-I O-acetyltransferase *(TBL) 0.03 Orthogroups_2024-Update
LOC_Os03g19470 No alias proteins of unknown function domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os04g42900 No alias expressed protein 0.03 Orthogroups_2024-Update
MA_10436441g0010 No alias (at3g12060 : 362.0) Encodes a member of the TBL... 0.03 Orthogroups_2024-Update
MA_467548g0010 No alias (at2g30010 : 216.0) Encodes a member of the TBL... 0.04 Orthogroups_2024-Update
PSME_00011723-RA No alias (at3g62390 : 317.0) Encodes a member of the TBL... 0.04 Orthogroups_2024-Update
PSME_00047187-RA No alias (at5g06700 : 508.0) Encodes a member of the TBL... 0.03 Orthogroups_2024-Update
Potri.002G195800 No alias TRICHOME BIREFRINGENCE-LIKE 6 0.03 Orthogroups_2024-Update
Potri.010G043300 No alias Plant protein of unknown function (DUF828) 0.03 Orthogroups_2024-Update
Pp1s390_21V6 No alias af361591_1 at5g06230 mbl20_11 0.02 Orthogroups_2024-Update
Seita.7G160900.1 No alias polysaccharide O-acetyltransferase *(TBR) 0.02 Orthogroups_2024-Update
Seita.9G429200.1 No alias polysaccharide O-acetyltransferase *(TBR) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR026057 PC-Esterase 224 367
IPR026057 PC-Esterase 127 222
IPR025846 PMR5_N_dom 74 126
No external refs found!