MA_129829g0010


Description : (at3g16080 : 128.0) Zinc-binding ribosomal protein family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L37e, conserved site (InterPro:IPR018267), Ribosomal protein, zinc-binding domain (InterPro:IPR011332), Ribosomal protein L37ae/L37e, N-terminal domain (InterPro:IPR011331), Ribosomal protein L37e (InterPro:IPR001569); BEST Arabidopsis thaliana protein match is: Zinc-binding ribosomal protein family protein (TAIR:AT1G52300.1); Has 993 Blast hits to 993 proteins in 346 species: Archae - 294; Bacteria - 0; Metazoa - 303; Fungi - 142; Plants - 122; Viruses - 0; Other Eukaryotes - 132 (source: NCBI BLink). & (reliability: 256.0) & (original description: no original description)


Gene families : OG_42_0001791 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001791_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_129829g0010
Cluster HCCA clusters: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
At1g15250 No alias 60S ribosomal protein L37-1... 0.04 Orthogroups_2024-Update
At3g16080 No alias 60S ribosomal protein L37-3... 0.03 Orthogroups_2024-Update
Bradi3g01190 No alias Zinc-binding ribosomal protein family protein 0.07 Orthogroups_2024-Update
Bradi3g55170 No alias Zinc-binding ribosomal protein family protein 0.05 Orthogroups_2024-Update
Brara.E01589.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.F00200.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Cre10.g430400 No alias Zinc-binding ribosomal protein family protein 0.02 Orthogroups_2024-Update
GRMZM2G168674 No alias Zinc-binding ribosomal protein family protein 0.02 Orthogroups_2024-Update
Glyma.08G205500 No alias Zinc-binding ribosomal protein family protein 0.09 Orthogroups_2024-Update
HORVU6Hr1G090070.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Mp2g12400.1 No alias component RPL37 of LSU proteome component 0.03 Orthogroups_2024-Update
Potri.018G036900 No alias Zinc-binding ribosomal protein family protein 0.03 Orthogroups_2024-Update
Pp1s152_133V6 No alias 60s ribosomal protein l37 0.05 Orthogroups_2024-Update
Pp1s222_87V6 No alias 60s ribosomal protein l37 0.04 Orthogroups_2024-Update
Pp1s24_197V6 No alias 60s ribosomal protein l37 0.03 Orthogroups_2024-Update
Pp1s3_512V6 No alias 60s ribosomal protein l37 0.04 Orthogroups_2024-Update
Pp1s475_18V6 No alias 60s ribosomal protein l37 0.07 Orthogroups_2024-Update
Pp1s83_87V6 No alias 60s ribosomal protein l37 0.03 Orthogroups_2024-Update
Seita.1G119400.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Seita.1G363500.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Sobic.001G347901.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Sobic.004G008400.1 No alias component *(eL37) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Solyc03g120780 No alias Ribosomal protein L37 (AHRD V3.3 *** K4BMM7_SOLLC) 0.04 Orthogroups_2024-Update
Solyc06g066660 No alias Ribosomal protein L37 (AHRD V3.3 *** M1BDD8_SOLTU) 0.04 Orthogroups_2024-Update
Solyc08g068180 No alias Ribosomal protein L37 (AHRD V3.3 *** K4CM42_SOLLC) 0.04 Orthogroups_2024-Update
Sopen03g039600 No alias Ribosomal protein L37e 0.03 Orthogroups_2024-Update
Sopen06g024930 No alias Ribosomal protein L37e 0.02 Orthogroups_2024-Update
evm.model.tig00020610.80 No alias (at1g52300 : 115.0) Zinc-binding ribosomal protein... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001569 Ribosomal_L37e 3 53
No external refs found!