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  5. MA_13199g0010

MA_13199g0010


Description : (at4g20780 : 115.0) Calcium sensor involved in trichome branching.; calmodulin like 42 (CML42); FUNCTIONS IN: calcium ion binding; INVOLVED IN: trichome branching; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin like 43 (TAIR:AT5G44460.1); Has 15351 Blast hits to 11255 proteins in 1265 species: Archae - 0; Bacteria - 33; Metazoa - 5903; Fungi - 3155; Plants - 4145; Viruses - 2; Other Eukaryotes - 2113 (source: NCBI BLink). & (q09011|cast_soltu : 110.0) Calcium-binding protein CAST - Solanum tuberosum (Potato) & (reliability: 230.0) & (original description: no original description)


Gene families : OG_42_0002982 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002982_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_13199g0010
Cluster HCCA clusters: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G349655 No alias calmodulin like 42 0.02 Orthogroups_2024-Update
MA_641437g0010 No alias (at4g20780 : 89.7) Calcium sensor involved in trichome... 0.03 Orthogroups_2024-Update
MA_8749g0010 No alias (at5g44460 : 149.0) calmodulin like 43 (CML43);... 0.04 Orthogroups_2024-Update
Sobic.002G419700.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Sopen10g027230 No alias EF hand 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 128 190
IPR002048 EF_hand_dom 57 106
No external refs found!