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  5. MA_131g0010

MA_131g0010


Description : (at4g02750 : 598.0) Tetratricopeptide repeat (TPR)-like superfamily protein; LOCATED IN: mitochondrion; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G09410.1); Has 56089 Blast hits to 14902 proteins in 275 species: Archae - 0; Bacteria - 15; Metazoa - 173; Fungi - 123; Plants - 55165; Viruses - 0; Other Eukaryotes - 613 (source: NCBI BLink). & (q76c99|rf1_orysa : 158.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 1196.0) & (original description: no original description)


Gene families : OG_42_0009211 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_131g0010
Cluster HCCA clusters: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Bradi3g16967 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 508 531
IPR002885 Pentatricopeptide_repeat 241 266
IPR002885 Pentatricopeptide_repeat 407 432
IPR002885 Pentatricopeptide_repeat 215 239
IPR002885 Pentatricopeptide_repeat 272 298
IPR032867 DYW_dom 606 730
IPR002885 Pentatricopeptide_repeat 138 186
IPR002885 Pentatricopeptide_repeat 331 379
IPR002885 Pentatricopeptide_repeat 433 481
IPR002885 Pentatricopeptide_repeat 299 328
IPR002885 Pentatricopeptide_repeat 102 135
No external refs found!