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  5. MA_132560g0010

MA_132560g0010


Description : (at5g15710 : 81.6) Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), F-box associated interaction domain (InterPro:IPR017451), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G30950.1); Has 1386 Blast hits to 1382 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1386; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 163.2) & (original description: no original description)


Gene families : OG_42_0001085 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_132560g0010
Cluster HCCA clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
MA_10433868g0010 No alias (at5g15710 : 118.0) Galactose oxidase/kelch repeat... 0.03 Orthogroups_2024-Update
MA_229034g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_2646g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_64059g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Pp1s306_67V6 No alias F17L21.13; F-box family protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 12 47
No external refs found!