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  5. MA_132680g0010

MA_132680g0010


Description : (at1g68810 : 173.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix 32 (TAIR:AT3G25710.1); Has 3080 Blast hits to 3073 proteins in 197 species: Archae - 0; Bacteria - 9; Metazoa - 353; Fungi - 47; Plants - 2657; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). & (reliability: 346.0) & (original description: no original description)


Gene families : OG_42_0000444 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000444_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_132680g0010
Cluster HCCA clusters: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Glyma.12G209900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G025800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Solyc10g078380 No alias bHLH transcription factor 064 0.03 Orthogroups_2024-Update
Sopen04g002080 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 136 183
No external refs found!