Description : (q40636|expa2_orysa : 350.0) Expansin-A2 precursor (OsEXPA2) (Alpha-expansin-2) (OsEXP2) (OsaEXPa1.23) (RiExB) (RiExC) - Oryza sativa (Rice) & (at3g55500 : 348.0) expansin-like protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin A16 (EXPA16); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, syncytium formation, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A4 (TAIR:AT2G39700.1); Has 2167 Blast hits to 2164 proteins in 159 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 38; Plants - 2087; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). & (reliability: 696.0) & (original description: no original description)
Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_134592g0010 | |
Cluster | HCCA clusters: Cluster_215 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At2g39700 | No alias | Expansin-A4 [Source:UniProtKB/Swiss-Prot;Acc:O48818] | 0.03 | Orthogroups_2024-Update | |
At3g03220 | No alias | Expansin-A13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9P0] | 0.04 | Orthogroups_2024-Update | |
At5g39280 | No alias | Expansin-A23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL79] | 0.04 | Orthogroups_2024-Update | |
Bradi5g04120 | No alias | expansin 11 | 0.02 | Orthogroups_2024-Update | |
Cre02.g076987 | No alias | expansin A15 | 0.02 | Orthogroups_2024-Update | |
GRMZM2G073373 | No alias | expansin 11 | 0.02 | Orthogroups_2024-Update | |
Glyma.06G143300 | No alias | expansin A8 | 0.03 | Orthogroups_2024-Update | |
Glyma.07G229000 | No alias | expansin A15 | 0.04 | Orthogroups_2024-Update | |
Glyma.14G221500 | No alias | expansin 11 | 0.04 | Orthogroups_2024-Update | |
MA_37884g0010 | No alias | (q40636|expa2_orysa : 400.0) Expansin-A2 precursor... | 0.03 | Orthogroups_2024-Update | |
Mp3g03890.1 | No alias | alpha-class expansin | 0.02 | Orthogroups_2024-Update | |
PSME_00011355-RA | No alias | (at2g40610 : 387.0) member of Alpha-Expansin Gene... | 0.02 | Orthogroups_2024-Update | |
PSME_00025835-RA | No alias | (at1g26770 : 394.0) Encodes an expansin. Naming... | 0.04 | Orthogroups_2024-Update | |
PSME_00051817-RA | No alias | (at1g20190 : 379.0) member of Alpha-Expansin Gene... | 0.03 | Orthogroups_2024-Update | |
Pp1s223_38V6 | No alias | alpha expansin xpa5 | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Predicted GO |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predicted GO |
MF | GO:0004386 | helicase activity | IEP | Predicted GO |
MF | GO:0004601 | peroxidase activity | IEP | Predicted GO |
BP | GO:0006401 | RNA catabolic process | IEP | Predicted GO |
BP | GO:0006402 | mRNA catabolic process | IEP | Predicted GO |
BP | GO:0006979 | response to oxidative stress | IEP | Predicted GO |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
MF | GO:0016209 | antioxidant activity | IEP | Predicted GO |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | Predicted GO |
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Predicted GO |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Predicted GO |
No external refs found! |