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  5. MA_134768g0010

MA_134768g0010


Description : (at1g80110 : 163.0) phloem protein 2-B11 (PP2-B11); FUNCTIONS IN: carbohydrate binding; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B12 (TAIR:AT5G24560.1); Has 567 Blast hits to 552 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 567; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 320.0) & (original description: no original description)


Gene families : OG_42_0000141 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_134768g0010
Cluster HCCA clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
A4A49_26461 No alias f-box protein pp2-b15 0.04 Orthogroups_2024-Update
At2g02250 No alias Putative F-box protein PP2-B2... 0.03 Orthogroups_2024-Update
Bradi1g00970 No alias phloem protein 2-B10 0.02 Orthogroups_2024-Update
Bradi3g17208 No alias phloem protein 2-B10 0.03 Orthogroups_2024-Update
Glyma.03G233800 No alias phloem protein 2-B15 0.05 Orthogroups_2024-Update
Glyma.19G231000 No alias phloem protein 2-B15 0.03 Orthogroups_2024-Update
HORVU7Hr1G012610.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g56840 No alias OsFBX70 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.7G060500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G408000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G340900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G119100.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc12g098190 No alias F-box family protein (AHRD V3.3 *** AT2G02240.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025886 PP2-like 208 363
IPR001810 F-box_dom 114 157
No external refs found!