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  5. MA_13546g0010

MA_13546g0010


Description : (at5g20480 : 145.0) Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.; EF-TU receptor (EFR); FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 7 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47090.1); Has 211073 Blast hits to 132033 proteins in 4602 species: Archae - 167; Bacteria - 19808; Metazoa - 69159; Fungi - 9873; Plants - 87247; Viruses - 333; Other Eukaryotes - 24486 (source: NCBI BLink). & (p93194|rpk1_iponi : 112.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 290.0) & (original description: no original description)


Gene families : OG_42_0000007 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_13546g0010
Cluster HCCA clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
120629 No alias Leucine-rich receptor-like protein kinase family protein 0.04 Orthogroups_2024-Update
128654 No alias Leucine-rich receptor-like protein kinase family protein 0.04 Orthogroups_2024-Update
Bradi1g01985 No alias EF-TU receptor 0.02 Orthogroups_2024-Update
Bradi1g47130 No alias Leucine-rich receptor-like protein kinase family protein 0.04 Orthogroups_2024-Update
GRMZM2G162829 No alias Leucine-rich repeat protein kinase family protein 0.04 Orthogroups_2024-Update
Glyma.01G152300 No alias Leucine-rich repeat protein kinase family protein 0.02 Orthogroups_2024-Update
LOC_Os02g12400 No alias receptor-like protein kinase precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g40240 No alias receptor kinase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g29790 No alias receptor kinase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g36190 No alias receptor kinase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g47310 No alias receptor kinase-like protein, identical, putative, expressed 0.02 Orthogroups_2024-Update
MA_10427797g0020 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10435743g0020 No alias (at1g35710 : 155.0) Protein kinase family protein with... 0.03 Orthogroups_2024-Update
MA_4617178g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_97035g0010 No alias (at2g24130 : 459.0) Leucine-rich receptor-like protein... 0.05 Orthogroups_2024-Update
PSME_00002258-RA No alias (at3g47570 : 249.0) Leucine-rich repeat protein kinase... 0.05 Orthogroups_2024-Update
PSME_00006646-RA No alias no hits & (original description: no original description) 0.08 Orthogroups_2024-Update
PSME_00009451-RA No alias (at5g46330 : 647.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
PSME_00011167-RA No alias (at4g08850 : 300.0) Leucine-rich repeat receptor-like... 0.04 Orthogroups_2024-Update
PSME_00014185-RA No alias (at3g24240 : 256.0) Leucine-rich repeat receptor-like... 0.03 Orthogroups_2024-Update
PSME_00016859-RA No alias (at5g46330 : 555.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
PSME_00020006-RA No alias (at5g44700 : 633.0) Encodes GASSHO2 (GSO2), a putative... 0.03 Orthogroups_2024-Update
PSME_00020947-RA No alias (at3g47110 : 620.0) Leucine-rich repeat protein kinase... 0.05 Orthogroups_2024-Update
PSME_00024176-RA No alias (at4g20140 : 447.0) Encodes GASSHO1 (GSO1), a putative... 0.03 Orthogroups_2024-Update
PSME_00025380-RA No alias (at3g24240 : 244.0) Leucine-rich repeat receptor-like... 0.03 Orthogroups_2024-Update
PSME_00027859-RA No alias (at4g08850 : 291.0) Leucine-rich repeat receptor-like... 0.03 Orthogroups_2024-Update
PSME_00029302-RA No alias (at5g46330 : 580.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
PSME_00031122-RA No alias (at5g46330 : 295.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
PSME_00032810-RA No alias (at5g46330 : 206.0) Encodes a leucine-rich repeat... 0.05 Orthogroups_2024-Update
PSME_00039609-RA No alias (at2g24130 : 270.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
PSME_00040826-RA No alias (at5g63930 : 192.0) Leucine-rich repeat protein kinase... 0.06 Orthogroups_2024-Update
PSME_00042436-RA No alias (at5g46330 : 119.0) Encodes a leucine-rich repeat... 0.08 Orthogroups_2024-Update
PSME_00042474-RA No alias (at3g47110 : 591.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00042752-RA No alias (at3g47090 : 296.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
PSME_00042816-RA No alias (at2g24130 : 468.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
PSME_00043437-RA No alias (at3g12610 : 154.0) Plays role in DNA-damage... 0.06 Orthogroups_2024-Update
PSME_00043445-RA No alias (at5g46330 : 407.0) Encodes a leucine-rich repeat... 0.03 Orthogroups_2024-Update
PSME_00044948-RA No alias (at3g47110 : 644.0) Leucine-rich repeat protein kinase... 0.03 Orthogroups_2024-Update
PSME_00050999-RA No alias (at5g46330 : 144.0) Encodes a leucine-rich repeat... 0.05 Orthogroups_2024-Update
PSME_00053239-RA No alias (at4g20140 : 438.0) Encodes GASSHO1 (GSO1), a putative... 0.06 Orthogroups_2024-Update
PSME_00053319-RA No alias (at1g34110 : 361.0) Leucine-rich receptor-like protein... 0.03 Orthogroups_2024-Update
PSME_00053750-RA No alias (at4g20140 : 428.0) Encodes GASSHO1 (GSO1), a putative... 0.03 Orthogroups_2024-Update
PSME_00054964-RA No alias (at5g62230 : 187.0) Encodes a receptor-like kinase that,... 0.04 Orthogroups_2024-Update
PSME_00055533-RA No alias (at3g47110 : 628.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
PSME_00055726-RA No alias (at3g47090 : 585.0) Leucine-rich repeat protein kinase... 0.07 Orthogroups_2024-Update
PSME_00055909-RA No alias (at3g47110 : 624.0) Leucine-rich repeat protein kinase... 0.04 Orthogroups_2024-Update
Potri.011G140900 No alias Leucine-rich repeat protein kinase family protein 0.03 Orthogroups_2024-Update
Seita.4G231200.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.5G106500.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.05 Orthogroups_2024-Update
Seita.5G281400.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.6G034700.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Seita.8G157000.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.03 Orthogroups_2024-Update
Seita.8G157300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.005G065000.1 No alias LRR-XII protein kinase & EC_2.7 transferase transferring... 0.03 Orthogroups_2024-Update
Sobic.005G187700.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.05 Orthogroups_2024-Update
Sopen02g010100 No alias Leucine Rich repeats (2 copies) 0.03 Orthogroups_2024-Update
Sopen02g021350 No alias Leucine Rich repeats (2 copies) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 136 194
IPR001611 Leu-rich_rpt 208 229
IPR013210 LRR_N_plant-typ 53 93
No external refs found!