MA_136157g0010


Description : (at5g19420 : 1024.0) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain; FUNCTIONS IN: chromatin binding, zinc ion binding, Ran GTPase binding; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, FYVE-type (InterPro:IPR000306), Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091), Zinc finger, FYVE-related (InterPro:IPR017455), Regulator of chromosome condensation, RCC1 (InterPro:IPR000408), Pleckstrin homology-type (InterPro:IPR011993), Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591), Zinc finger, FYVE/PHD-type (InterPro:IPR011011); BEST Arabidopsis thaliana protein match is: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (TAIR:AT5G12350.1). & (reliability: 2048.0) & (original description: no original description)


Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_136157g0010

Target Alias Description ECC score Gene Family Method Actions
Brara.C00879.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G02164.1 No alias regulatory protein *(RLD) of gravity sensing 0.02 Orthogroups_2024-Update
Brara.G03479.1 No alias regulatory protein *(RLD) of gravity sensing 0.02 Orthogroups_2024-Update
Glyma.18G119000 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update
Pp1s51_210V6 No alias F7K24.170; expressed protein [Arabidopsis thaliana] 0.04 Orthogroups_2024-Update
Solyc11g065120 No alias Regulator of chromosome condensation (RCC1) family... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 644 710
IPR000408 Reg_chr_condens 593 640
IPR000408 Reg_chr_condens 490 536
IPR000408 Reg_chr_condens 539 588
IPR000408 Reg_chr_condens 368 420
IPR000408 Reg_chr_condens 317 365
IPR000408 Reg_chr_condens 424 472
No external refs found!