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  5. MA_13676g0010

MA_13676g0010


Description : (at1g68920 : 228.0) basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: cryptochrome-interacting basic-helix-loop-helix 5 (TAIR:AT1G26260.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 456.0) & (original description: no original description)


Gene families : OG_42_0000125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_13676g0010

Target Alias Description ECC score Gene Family Method Actions
At1g68920 No alias Transcription factor bHLH49... 0.03 Orthogroups_2024-Update
At5g62610 No alias Transcription factor bHLH79... 0.03 Orthogroups_2024-Update
Bradi2g58630 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Brara.E03215.1 No alias regulatory protein (CIB) of blue light perception &... 0.03 Orthogroups_2024-Update
HORVU4Hr1G009970.2 No alias regulatory protein (CIB) of blue light perception &... 0.07 Orthogroups_2024-Update
Seita.6G231000.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Sopen06g034560 No alias Helix-loop-helix DNA-binding domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 339 387
No external refs found!