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  5. MA_137730g0010

MA_137730g0010


Description : (at1g49450 : 217.0) Transducin/WD40 repeat-like superfamily protein; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781), G-protein beta WD-40 repeat, region (InterPro:IPR020472); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G18950.1); Has 31816 Blast hits to 17355 proteins in 629 species: Archae - 28; Bacteria - 4541; Metazoa - 11860; Fungi - 7305; Plants - 3928; Viruses - 0; Other Eukaryotes - 4154 (source: NCBI BLink). & (reliability: 412.0) & (original description: no original description)


Gene families : OG_42_0000343 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_137730g0010
Cluster HCCA clusters: Cluster_294

Target Alias Description ECC score Gene Family Method Actions
A4A49_30080 No alias zinc finger ccch domain-containing protein 62 0.03 Orthogroups_2024-Update
At5g50120 No alias Similarity to GTP-binding regulatory protein and... 0.02 Orthogroups_2024-Update
Bradi4g02925 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.A02901.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K00352.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G099023 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.06G084700 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G356400 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.4G105600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G449800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G123000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g109120 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.02 Orthogroups_2024-Update
Solyc04g005020 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc12g044320 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen02g034840 No alias WD domain, G-beta repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 320 349
IPR001680 WD40_repeat 364 435
IPR001680 WD40_repeat 271 305
IPR001680 WD40_repeat 208 244
IPR001680 WD40_repeat 165 202
No external refs found!