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  5. MA_139689g0010

MA_139689g0010


Description : (at3g58520 : 327.0) Ubiquitin carboxyl-terminal hydrolase family protein; CONTAINS InterPro DOMAIN/s: RNA recognition domain, plant (InterPro:IPR021099); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase family protein (TAIR:AT5G48040.1); Has 412 Blast hits to 406 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 412; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 654.0) & (original description: no original description)


Gene families : OG_42_0004201 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004201_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_139689g0010
Cluster HCCA clusters: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
At3g58520 No alias AT3g58520/F14P22_110 [Source:UniProtKB/TrEMBL;Acc:Q940L8] 0.02 Orthogroups_2024-Update
GRMZM2G172158 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.02 Orthogroups_2024-Update
PSME_00040155-RA No alias (at5g48040 : 362.0) Ubiquitin carboxyl-terminal... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0046486 glycerolipid metabolic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0046834 lipid phosphorylation IEP Predicted GO
BP GO:0046854 phosphatidylinositol phosphorylation IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR021099 PORR_domain 2 313
No external refs found!