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  5. Solyc10g047350

Solyc10g047350


Description : Lysine-specific histone demethylase 1-1-like protein (AHRD V3.3 *-* W9S433_9ROSA)


Gene families : OG_42_0001212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001212_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g047350
Cluster HCCA clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g51880 No alias amine oxidase, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s48_113V6 No alias flavin-containing amine oxidase domain-containing 0.03 Orthogroups_2024-Update
Sopen10g017630 No alias Flavin containing amine oxidoreductase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 260 338
IPR007526 SWIRM 154 231
No external refs found!