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  5. MA_140124g0010

MA_140124g0010


Description : (at5g64570 : 940.0) Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.; beta-D-xylosidase 4 (XYL4); FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: xylan catabolic process; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-xylosidase 3 (TAIR:AT5G09730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p83344|xynb_prupe : 480.0) Putative beta-D-xylosidase (EC 3.2.1.-) (PpAz152) (Fragment) - Prunus persica (Peach) & (reliability: 1880.0) & (original description: no original description)


Gene families : OG_42_0000397 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_140124g0010
Cluster HCCA clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
419541 No alias Glycosyl hydrolase family protein 0.03 Orthogroups_2024-Update
A4A49_10220 No alias beta-xylosidasealpha-l-arabinofuranosidase 2 0.02 Orthogroups_2024-Update
A4A49_15163 No alias putative beta-d-xylosidase 7 0.03 Orthogroups_2024-Update
A4A49_17457 No alias beta-d-xylosidase 1 0.05 Orthogroups_2024-Update
AC234091.1_FG001 No alias Glycosyl hydrolase family protein 0.02 Orthogroups_2024-Update
At5g49360 No alias Beta-D-xylosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGY1] 0.03 Orthogroups_2024-Update
Brara.B03487.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.06 Orthogroups_2024-Update
Brara.E02235.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
Brara.F02936.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.04 Orthogroups_2024-Update
Brara.I00420.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.09 Orthogroups_2024-Update
GRMZM2G035503 No alias Glycosyl hydrolase family protein 0.02 Orthogroups_2024-Update
Mp2g08000.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.04 Orthogroups_2024-Update
PSME_00042009-RA No alias (at5g64570 : 926.0) Encodes a beta-d-xylosidase that... 0.03 Orthogroups_2024-Update
Potri.001G206800 No alias beta-D-xylosidase 4 0.03 Orthogroups_2024-Update
Potri.009G088800 No alias Glycosyl hydrolase family protein 0.04 Orthogroups_2024-Update
Pp1s196_21V6 No alias periplasmic beta-glucosidase 0.02 Orthogroups_2024-Update
Seita.1G323200.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
Seita.7G257800.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
Solyc01g104950 No alias LEXYL2 0.02 Orthogroups_2024-Update
Solyc11g044910 No alias Beta-D-xylosidase family protein (AHRD V3.3 *** B9HWX2_POPTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 372 592
IPR001764 Glyco_hydro_3_N 83 325
IPR026891 Fn3-like 657 723
No external refs found!