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  5. MA_140486g0010

MA_140486g0010


Description : (at4g22810 : 179.0) Predicted AT-hook DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), Predicted AT-hook DNA-binding (InterPro:IPR014476); BEST Arabidopsis thaliana protein match is: Predicted AT-hook DNA-binding family protein (TAIR:AT4G12050.1); Has 813 Blast hits to 808 proteins in 45 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 2; Plants - 764; Viruses - 2; Other Eukaryotes - 7 (source: NCBI BLink). & (reliability: 342.0) & (original description: no original description)


Gene families : OG_42_0000350 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_140486g0010
Cluster HCCA clusters: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
Glyma.20G087200 No alias AT-hook motif nuclear-localized protein 20 0.02 Orthogroups_2024-Update
Potri.002G149300 No alias AT-hook motif nuclear-localized protein 22 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 88 200
No external refs found!