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  5. Solyc10g047470

Solyc10g047470


Description : LOW QUALITY:NAD(P)H-quinone oxidoreductase subunit H, chloroplastic (AHRD V3.3 *-* NDHH_TOBAC)


Gene families : OG_42_0000901 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000901_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g047470
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
137890 No alias NAD(P)H dehydrogenase subunit H 0.02 Orthogroups_2024-Update
HORVU4Hr1G006250.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g065770 No alias NADH dehydrogenase subunit 7 (AHRD V3.3 *** ATMG00510.1) 0.03 Orthogroups_2024-Update
Solyc07g032430 No alias NAD(P)H-quinone oxidoreductase subunit H, chloroplastic... 0.03 Orthogroups_2024-Update
Sopen10g026770 No alias Respiratory-chain NADH dehydrogenase, 49 Kd subunit 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEA InterProScan predictions
MF GO:0048038 quinone binding IEA InterProScan predictions
MF GO:0051287 NAD binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
InterPro domains Description Start Stop
IPR001135 NADH_Q_OxRdtase_suD 15 91
No external refs found!