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  5. MA_14543g0010

MA_14543g0010


Description : (p31674|rs15_orysa : 245.0) 40S ribosomal protein S15 - Oryza sativa (Rice) & (at5g09510 : 231.0) Ribosomal protein S19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S15, eukaryotic/archaeal (InterPro:IPR005713), Ribosomal protein S19/S15 (InterPro:IPR002222), Ribosomal protein S19 conserved site (InterPro:IPR020934); BEST Arabidopsis thaliana protein match is: cytosolic ribosomal protein S15 (TAIR:AT1G04270.1); Has 8201 Blast hits to 8201 proteins in 3047 species: Archae - 256; Bacteria - 4022; Metazoa - 278; Fungi - 236; Plants - 1507; Viruses - 0; Other Eukaryotes - 1902 (source: NCBI BLink). & (reliability: 462.0) & (original description: no original description)


Gene families : OG_42_0001901 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001901_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_14543g0010
Cluster HCCA clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
172403 No alias Ribosomal protein S19 family protein 0.07 Orthogroups_2024-Update
Bradi1g05340 No alias Ribosomal protein S19 family protein 0.09 Orthogroups_2024-Update
Bradi1g55280 No alias Ribosomal protein S19 family protein 0.06 Orthogroups_2024-Update
Brara.H03058.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.12 Orthogroups_2024-Update
Brara.I05501.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Brara.J00241.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Cre08.g360900 No alias Ribosomal protein S19 family protein 0.08 Orthogroups_2024-Update
Glyma.05G234800 No alias Ribosomal protein S19 family protein 0.03 Orthogroups_2024-Update
Glyma.07G269600 No alias Ribosomal protein S19 family protein 0.08 Orthogroups_2024-Update
Glyma.08G042300 No alias Ribosomal protein S19 family protein 0.04 Orthogroups_2024-Update
Glyma.17G004300 No alias Ribosomal protein S19 family protein 0.07 Orthogroups_2024-Update
HORVU2Hr1G057430.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Kfl00160_0050 kfl00160_0050_v1.1 (p31674|rs15_orysa : 187.0) 40S ribosomal protein S15 -... 0.04 Orthogroups_2024-Update
LOC_Os03g58430 No alias 40S ribosomal protein S15, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g08660 No alias 40S ribosomal protein S15, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00033145-RA No alias (p31674|rs15_orysa : 265.0) 40S ribosomal protein S15 -... 0.07 Orthogroups_2024-Update
Pp1s13_413V6 No alias 40s ribosomal protein s15 0.08 Orthogroups_2024-Update
Pp1s223_96V6 No alias 40s ribosomal protein s15 0.07 Orthogroups_2024-Update
Pp1s47_42V6 No alias 40s ribosomal protein s15 0.14 Orthogroups_2024-Update
Pp1s91_124V6 No alias 40s ribosomal protein s15 0.08 Orthogroups_2024-Update
Seita.2G059900.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Seita.9G053600.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Sobic.001G054900.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Sobic.002G056200.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.07 Orthogroups_2024-Update
Solyc02g082000 No alias Ribosomal protein S19 family protein (AHRD V3.3 *** AT5G09500.1) 0.07 Orthogroups_2024-Update
Solyc06g053820 No alias Chloroplast omega-3 fatty acid desaturase (AHRD V3.3 --*... 0.05 Orthogroups_2024-Update
Solyc09g083370 No alias Ribosomal protein S19 family protein (AHRD V3.3 *** AT5G09510.1) 0.06 Orthogroups_2024-Update
Sopen02g026630 No alias Ribosomal protein S19 0.08 Orthogroups_2024-Update
Sopen06g018940 No alias Ribosomal protein S19 0.06 Orthogroups_2024-Update
Sopen09g032290 No alias Ribosomal protein S19 0.07 Orthogroups_2024-Update
evm.model.contig_651.1 No alias (at5g09500 : 219.0) Ribosomal protein S19 family... 0.14 Orthogroups_2024-Update
evm.model.tig00020830.61 No alias (p31674|rs15_orysa : 236.0) 40S ribosomal protein S15 -... 0.11 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predicted GO
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
InterPro domains Description Start Stop
IPR002222 Ribosomal_S19 49 134
No external refs found!