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  5. MA_153432g0010

MA_153432g0010


Description : (p27141|cahc_tobac : 191.0) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) - Nicotiana tabacum (Common tobacco) & (at5g14740 : 188.0) Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform.; carbonic anhydrase 2 (CA2); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: defense response to bacterium, carbon utilization; LOCATED IN: cytosol, chloroplast thylakoid membrane, apoplast, chloroplast, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: carbonic anhydrase 1 (TAIR:AT3G01500.2); Has 5023 Blast hits to 5008 proteins in 1512 species: Archae - 36; Bacteria - 3889; Metazoa - 60; Fungi - 203; Plants - 352; Viruses - 0; Other Eukaryotes - 483 (source: NCBI BLink). & (reliability: 376.0) & (original description: no original description)


Gene families : OG_42_0000693 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_153432g0010
Cluster HCCA clusters: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
At1g70410 No alias Beta carbonic anhydrase 4... 0.02 Orthogroups_2024-Update
At3g01500 No alias Beta carbonic anhydrase 1, chloroplastic... 0.02 Orthogroups_2024-Update
Bradi2g44856 No alias carbonic anhydrase 2 0.05 Orthogroups_2024-Update
Glyma.01G030500 No alias carbonic anhydrase 2 0.03 Orthogroups_2024-Update
Glyma.13G257200 No alias beta carbonic anhydrase 5 0.02 Orthogroups_2024-Update
Glyma.15G057700 No alias beta carbonic anhydrase 5 0.03 Orthogroups_2024-Update
PSME_00037903-RA No alias (at3g01500 : 307.0) Encodes a putative beta-carbonic... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004779 sulfate adenylyltransferase activity IEP Predicted GO
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001765 Carbonic_anhydrase 96 193
No external refs found!