1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_161903g0010

MA_161903g0010


Description : (p37831|lox1_soltu : 733.0) Lipoxygenase 1 (EC 1.13.11.12) - Solanum tuberosum (Potato) & (at3g22400 : 726.0) LOX5; FUNCTIONS IN: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding; INVOLVED IN: root development; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipoxygenase, LH2 (InterPro:IPR001024), Lipoxygenase, iron binding site (InterPro:IPR020833), Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Lipoxygenase, conserved site (InterPro:IPR020834), Lipoxygenase, C-terminal (InterPro:IPR013819), Lipoxygenase, plant (InterPro:IPR001246); BEST Arabidopsis thaliana protein match is: lipoxygenase 1 (TAIR:AT1G55020.1); Has 1471 Blast hits to 1435 proteins in 177 species: Archae - 0; Bacteria - 82; Metazoa - 527; Fungi - 46; Plants - 787; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 1452.0) & (original description: no original description)


Gene families : OG_42_0000116 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_161903g0010
Cluster HCCA clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
170977 No alias lipoxygenase 1 0.02 Orthogroups_2024-Update
439120 No alias lipoxygenase 1 0.03 Orthogroups_2024-Update
Bradi3g39980 No alias lipoxygenase 2 0.03 Orthogroups_2024-Update
Glyma.08G189500 No alias lipoxygenase 1 0.03 Orthogroups_2024-Update
Glyma.09G113650 No alias lipoxygenase 1 0.02 Orthogroups_2024-Update
Glyma.20G053700 No alias lipoxygenase 2 0.03 Orthogroups_2024-Update
HORVU5Hr1G093700.3 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
LOC_Os03g49260 No alias lipoxygenase, putative, expressed 0.03 Orthogroups_2024-Update
MA_10436100g0020 No alias (at3g22400 : 292.0) LOX5; FUNCTIONS IN: oxidoreductase... 0.03 Orthogroups_2024-Update
Mp8g12930.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.02 Orthogroups_2024-Update
PSME_00002206-RA No alias (p37831|lox1_soltu : 871.0) Lipoxygenase 1 (EC... 0.04 Orthogroups_2024-Update
Potri.001G015500 No alias lipoxygenase 2 0.03 Orthogroups_2024-Update
Pp1s171_146V6 No alias lipoxygenase 0.02 Orthogroups_2024-Update
Seita.9G127700.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
Solyc01g006560 No alias Lipoxygenase (AHRD V3.3 *** C0KKU8_SOLLC) 0.03 Orthogroups_2024-Update
Sopen01g042720 No alias Lipoxygenase 0.02 Orthogroups_2024-Update
Sopen09g030670 No alias Lipoxygenase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR013819 LipOase_C 301 882
IPR013819 LipOase_C 231 271
IPR001024 PLAT/LH2_dom 129 218
No external refs found!