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  5. MA_165094g0010

MA_165094g0010


Description : (at5g24490 : 253.0) 30S ribosomal protein, putative; FUNCTIONS IN: structural constituent of ribosome, binding; INVOLVED IN: translation, primary metabolic process; LOCATED IN: ribosome, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S30Ae/sigma 54 modulation protein (InterPro:IPR003489); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (p19954|rr30_spiol : 248.0) Plastid-specific 30S ribosomal protein 1, chloroplast precursor (PSRP-1) (CS-S5) (CS5) (S22) (Ribosomal protein 1) - Spinacia oleracea (Spinach) & (reliability: 506.0) & (original description: no original description)


Gene families : OG_42_0003718 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003718_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_165094g0010
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
MA_188710g0010 No alias (p19954|rr30_spiol : 227.0) Plastid-specific 30S... 0.03 Orthogroups_2024-Update
Potri.012G010200 No alias 30S ribosomal protein, putative 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0044238 primary metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR032528 Ribosom_S30AE_C 240 294
IPR003489 RHF/RaiA 91 187
No external refs found!