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  5. MA_166764g0010

MA_166764g0010


Description : (q7x6j9|exb17_orysa : 194.0) Expansin-B17 precursor (OsEXPB17) (Beta-expansin-17) (OsaEXPb1.13) - Oryza sativa (Rice) & (at4g28250 : 191.0) putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.; expansin B3 (EXPB3); INVOLVED IN: response to cyclopentenone, syncytium formation, plant-type cell wall organization, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Rare lipoprotein A (InterPro:IPR005132), Major pollen allergen Lol pI (InterPro:IPR005795), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin B1 (TAIR:AT2G20750.1); Has 2090 Blast hits to 2086 proteins in 147 species: Archae - 0; Bacteria - 32; Metazoa - 0; Fungi - 5; Plants - 2024; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). & (reliability: 382.0) & (original description: no original description)


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_166764g0010
Cluster HCCA clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
171427 No alias expansin B3 0.03 Orthogroups_2024-Update
At4g28250 No alias EXPB3 [Source:UniProtKB/TrEMBL;Acc:A0A178USU9] 0.04 Orthogroups_2024-Update
Brara.G00015.1 No alias beta-class expansin 0.02 Orthogroups_2024-Update
Brara.K00035.1 No alias beta-class expansin 0.02 Orthogroups_2024-Update
HORVU1Hr1G054250.9 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os10g40700 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00003968-RA No alias (q7x6j9|exb17_orysa : 259.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
PSME_00008080-RA No alias (q7x6j9|exb17_orysa : 305.0) Expansin-B17 precursor... 0.04 Orthogroups_2024-Update
PSME_00024925-RA No alias (q7x6j9|exb17_orysa : 300.0) Expansin-B17 precursor... 0.04 Orthogroups_2024-Update
PSME_00039752-RA No alias (q7x6j9|exb17_orysa : 251.0) Expansin-B17 precursor... 0.06 Orthogroups_2024-Update
PSME_00044323-RA No alias (at2g20750 : 200.0) member of BETA-EXPANSINS. Naming... 0.02 Orthogroups_2024-Update
PSME_00044771-RA No alias (at2g20750 : 147.0) member of BETA-EXPANSINS. Naming... 0.04 Orthogroups_2024-Update
PSME_00048195-RA No alias (q7xt40|exb15_orysa : 117.0) Expansin-B15 precursor... 0.03 Orthogroups_2024-Update
Potri.014G066300 No alias expansin B2 0.02 Orthogroups_2024-Update
Pp1s100_99V6 No alias beta-expansin 3 0.02 Orthogroups_2024-Update
Pp1s147_37V6 No alias beta-expansin 3 0.02 Orthogroups_2024-Update
Pp1s251_59V6 No alias beta-expansin 3 0.04 Orthogroups_2024-Update
Pp1s313_58V6 No alias beta-expansin 3 0.04 Orthogroups_2024-Update
Pp1s313_59V6 No alias beta-expansin 3 0.04 Orthogroups_2024-Update
Seita.8G190900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G301600.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
BP GO:1901292 nucleoside phosphate catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 126 202
No external refs found!