- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : (at1g28130 : 670.0) encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin.; GH3.17; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT5G54510.1); Has 1092 Blast hits to 1087 proteins in 203 species: Archae - 0; Bacteria - 311; Metazoa - 52; Fungi - 2; Plants - 653; Viruses - 0; Other Eukaryotes - 74 (source: NCBI BLink). & (p0c0m3|gh311_orysa : 596.0) Probable indole-3-acetic acid-amido synthetase GH3.11 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 11) (OsGH3-11) - Oryza sativa (Rice) & (reliability: 1340.0) & (original description: no original description)
Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_16777g0010 | |
| Cluster | HCCA clusters: Cluster_101 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 115497 | No alias | Auxin-responsive GH3 family protein | 0.02 | Orthogroups_2024-Update | |
| A4A49_27021 | No alias | putative indole-3-acetic acid-amido synthetase gh3.1 | 0.02 | Orthogroups_2024-Update | |
| At2g23170 | No alias | Indole-3-acetic acid-amido synthetase GH3.3... | 0.03 | Orthogroups_2024-Update | |
| At5g13360 | No alias | Auxin-responsive GH3 family protein... | 0.03 | Orthogroups_2024-Update | |
| Brara.A01696.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Brara.C02329.1 | No alias | jasmonoyl-amino acid synthetase *(JAR1) | 0.03 | Orthogroups_2024-Update | |
| Brara.I05217.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.I05218.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G410567 | No alias | Auxin-responsive GH3 family protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.12G103500 | No alias | Auxin-responsive GH3 family protein | 0.02 | Orthogroups_2024-Update | |
| HORVU1Hr1G092890.5 | No alias | jasmonoyl-amino acid synthetase *(JAR1) | 0.04 | Orthogroups_2024-Update | |
| MA_10178158g0010 | No alias | (at5g54510 : 259.0) Encodes an IAA-amido synthase that... | 0.03 | Orthogroups_2024-Update | |
| PSME_00047176-RA | No alias | (at2g14960 : 265.0) encodes a protein similar to... | 0.01 | Orthogroups_2024-Update | |
| Potri.007G050300 | No alias | Auxin-responsive GH3 family protein | 0.04 | Orthogroups_2024-Update | |
| Potri.013G144300 | No alias | Auxin-responsive GH3 family protein | 0.03 | Orthogroups_2024-Update | |
| Potri.014G095500 | No alias | Auxin-responsive GH3 family protein | 0.04 | Orthogroups_2024-Update | |
| Pp1s323_82V6 | No alias | putative auxin-responsive GH3 protein [Oryza sativa... | 0.02 | Orthogroups_2024-Update | |
| Sobic.009G187700.1 | No alias | indole-3-acetic acid-amido synthetase *(GH3) | 0.02 | Orthogroups_2024-Update | |
| Solyc02g064830 | No alias | Indole-3-acetic acid-amido synthetas 3-3 | 0.03 | Orthogroups_2024-Update | |
| Solyc10g006630 | No alias | Auxin-responsive GH3 family protein (AHRD V3.3 *** AT5G54510.1) | 0.02 | Orthogroups_2024-Update | |
| Solyc10g009620 | No alias | Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4) | 0.03 | Orthogroups_2024-Update | |
| Solyc10g011660 | No alias | Auxin-responsive GH3 family protein (AHRD V3.3 *** AT2G46370.4) | 0.03 | Orthogroups_2024-Update | |
| Sopen07g026580 | No alias | GH3 auxin-responsive promoter | 0.02 | Orthogroups_2024-Update | |
| Sopen07g028470 | No alias | GH3 auxin-responsive promoter | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000723 | telomere maintenance | IEP | Predicted GO |
| MF | GO:0003678 | DNA helicase activity | IEP | Predicted GO |
| MF | GO:0004386 | helicase activity | IEP | Predicted GO |
| MF | GO:0004672 | protein kinase activity | IEP | Predicted GO |
| BP | GO:0006464 | cellular protein modification process | IEP | Predicted GO |
| BP | GO:0006468 | protein phosphorylation | IEP | Predicted GO |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Predicted GO |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Predicted GO |
| MF | GO:0016301 | kinase activity | IEP | Predicted GO |
| BP | GO:0016310 | phosphorylation | IEP | Predicted GO |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Predicted GO |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Predicted GO |
| BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
| BP | GO:0032200 | telomere organization | IEP | Predicted GO |
| BP | GO:0036211 | protein modification process | IEP | Predicted GO |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0043412 | macromolecule modification | IEP | Predicted GO |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0060249 | anatomical structure homeostasis | IEP | Predicted GO |
| MF | GO:0071949 | FAD binding | IEP | Predicted GO |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004993 | GH3 | 19 | 558 |
| No external refs found! |