1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc10g049660

Solyc10g049660


Description : Phototropic-responsive NPH3 family protein (AHRD V3.3 *** B9HMY5_POPTR)


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g049660
Cluster HCCA clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
A4A49_25271 No alias btbpoz domain-containing protein npy2 0.03 Orthogroups_2024-Update
At5g13600 No alias Putative BTB/POZ domain-containing protein At5g13600... 0.03 Orthogroups_2024-Update
Glyma.02G237100 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
MA_10431089g0010 No alias (at3g44820 : 615.0) Phototropic-responsive NPH3 family... 0.03 Orthogroups_2024-Update
Potri.004G189800 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Solyc11g066730 No alias phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 210 458
IPR000210 BTB/POZ_dom 27 117
No external refs found!