- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : (at1g07900 : 137.0) LOB domain-containing protein 1 (LBD1); CONTAINS InterPro DOMAIN/s: Lateral organ boundaries, LOB (InterPro:IPR004883); BEST Arabidopsis thaliana protein match is: LOB domain-containing protein 11 (TAIR:AT2G28500.1); Has 1035 Blast hits to 1030 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1035; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (reliability: 274.0) & (original description: no original description)
Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_170369g0010 | |
| Cluster | HCCA clusters: Cluster_192 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Kfl00147_0060 | kfl00147_0060_v1.1 | (at1g65620 : 174.0) Required for formation of a... | 0.02 | Orthogroups_2024-Update | |
| MA_55357g0010 | No alias | (at1g07900 : 140.0) LOB domain-containing protein 1... | 0.03 | Orthogroups_2024-Update | |
| MA_85817g0010 | No alias | (at1g07900 : 152.0) LOB domain-containing protein 1... | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity | IEP | Predicted GO |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Predicted GO |
| CC | GO:0030880 | RNA polymerase complex | IEP | Predicted GO |
| CC | GO:0031225 | anchored component of membrane | IEP | Predicted GO |
| CC | GO:0031226 | intrinsic component of plasma membrane | IEP | Predicted GO |
| CC | GO:0044459 | plasma membrane part | IEP | Predicted GO |
| CC | GO:0046658 | anchored component of plasma membrane | IEP | Predicted GO |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predicted GO |
| CC | GO:1990234 | transferase complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 28 | 125 |
| No external refs found! |