1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_172842g0010

MA_172842g0010


Description : (at3g50070 : 166.0) Encode CYCD3;3, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.; CYCLIN D3;3 (CYCD3;3); FUNCTIONS IN: cyclin-dependent protein kinase activity; INVOLVED IN: regulation of cell cycle, regulation of cell proliferation; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D3;2 (TAIR:AT5G67260.1); Has 3177 Blast hits to 3175 proteins in 306 species: Archae - 0; Bacteria - 0; Metazoa - 1493; Fungi - 379; Plants - 953; Viruses - 3; Other Eukaryotes - 349 (source: NCBI BLink). & (reliability: 332.0) & (original description: no original description)


Gene families : OG_42_0000136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_172842g0010
Cluster HCCA clusters: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
A4A49_04871 No alias cyclin-d3-2 0.04 Orthogroups_2024-Update
Brara.G01181.1 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
GRMZM2G007130 No alias cyclin d5;1 0.04 Orthogroups_2024-Update
GRMZM2G047637 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
GRMZM2G476685 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
Glyma.02G040500 No alias CYCLIN D4;1 0.03 Orthogroups_2024-Update
Glyma.08G280600 No alias CYCLIN D4;1 0.01 Orthogroups_2024-Update
Glyma.12G105600 No alias Cyclin D6;1 0.03 Orthogroups_2024-Update
Glyma.15G066200 No alias Cyclin D6;1 0.01 Orthogroups_2024-Update
LOC_Os08g37390 No alias cyclin, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G292300 No alias CYCLIN D1;1 0.03 Orthogroups_2024-Update
Potri.011G040900 No alias Cyclin D6;1 0.02 Orthogroups_2024-Update
Seita.6G185800.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Sobic.005G231400.2 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Solyc02g092980 No alias cyclin D3.1 0.03 Orthogroups_2024-Update
Solyc05g006050 No alias cyclinD1_1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR006671 Cyclin_N 79 203
IPR004367 Cyclin_C-dom 206 280
No external refs found!