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Description : (at4g24210 : 99.0) F-box protein that is involved in GA signaling. Regulates seed germination. Component of E3 ubiquitin complex. Interacts with DELLA proteins.; SLEEPY1 (SLY1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G48170.1); Has 122 Blast hits to 122 proteins in 25 species: Archae - 0; Bacteria - 2; Metazoa - 2; Fungi - 9; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). & (q7xak4|gid2_orysa : 90.9) F-box protein GID2 (Gibberellin-insensitive dwarf protein 2) (Protein GIBBERELLIN INSENSITIVE DWARF2) - Oryza sativa (Rice) & (reliability: 198.0) & (original description: no original description)
Gene families : OG_42_0002089 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002089_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_173500g0010 | |
| Cluster | HCCA clusters: Cluster_89 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At4g24210 | No alias | SLY1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5B2] | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G470100.1 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Predicted GO |
| MF | GO:0016843 | amine-lyase activity | IEP | Predicted GO |
| MF | GO:0016844 | strictosidine synthase activity | IEP | Predicted GO |
| CC | GO:0030880 | RNA polymerase complex | IEP | Predicted GO |
| BP | GO:0040008 | regulation of growth | IEP | Predicted GO |
| BP | GO:0045926 | negative regulation of growth | IEP | Predicted GO |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001810 | F-box_dom | 22 | 61 |
| No external refs found! |