Description : (at5g06490 : 90.5) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G35910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 181.0) & (original description: no original description)
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_17362g0010 | |
Cluster | HCCA clusters: Cluster_153 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
172324 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
A4A49_09451 | No alias | ring-h2 finger protein atl72 | 0.02 | Orthogroups_2024-Update | |
A4A49_10444 | No alias | e3 ubiquitin-protein ligase atl9 | 0.02 | Orthogroups_2024-Update | |
A4A49_37314 | No alias | e3 ubiquitin-protein ligase atl9 | 0.02 | Orthogroups_2024-Update | |
Brara.G03107.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Brara.H01648.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Brara.I02379.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.05 | Orthogroups_2024-Update | |
GRMZM2G015409 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.13G042300 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G074210.1 | No alias | regulatory ubiquitin-protein ligase *(PRU2) | 0.03 | Orthogroups_2024-Update | |
HORVU5Hr1G103740.2 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
LOC_Os12g05370 | No alias | RING-H2 finger protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
Mp2g11860.1 | No alias | RING-H2-class E3 ligase | 0.02 | Orthogroups_2024-Update | |
PSME_00003022-RA | No alias | (at1g72200 : 164.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
PSME_00042839-RA | No alias | (at4g35480 : 80.9) Encodes a putative RING-H2 finger... | 0.03 | Orthogroups_2024-Update | |
Potri.016G136200 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
Seita.1G197500.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Seita.1G197600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Seita.2G087800.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.5G023000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.7G110600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
Seita.7G218600.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
Seita.9G341100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.003G288401.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.003G299800.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
Sobic.004G170300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Solyc07g053420 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT2G42360.1) | 0.03 | Orthogroups_2024-Update | |
Sopen11g002340 | No alias | Ring finger domain | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | Predicted GO |
MF | GO:0004888 | transmembrane signaling receptor activity | IEP | Predicted GO |
MF | GO:0004970 | ionotropic glutamate receptor activity | IEP | Predicted GO |
MF | GO:0005230 | extracellular ligand-gated ion channel activity | IEP | Predicted GO |
BP | GO:0006629 | lipid metabolic process | IEP | Predicted GO |
MF | GO:0008066 | glutamate receptor activity | IEP | Predicted GO |
MF | GO:0015276 | ligand-gated ion channel activity | IEP | Predicted GO |
BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
MF | GO:0022824 | transmitter-gated ion channel activity | IEP | Predicted GO |
MF | GO:0022834 | ligand-gated channel activity | IEP | Predicted GO |
MF | GO:0022835 | transmitter-gated channel activity | IEP | Predicted GO |
MF | GO:0030594 | neurotransmitter receptor activity | IEP | Predicted GO |
MF | GO:0030599 | pectinesterase activity | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
CC | GO:0032993 | protein-DNA complex | IEP | Predicted GO |
MF | GO:0038023 | signaling receptor activity | IEP | Predicted GO |
BP | GO:0040008 | regulation of growth | IEP | Predicted GO |
BP | GO:0042545 | cell wall modification | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044427 | chromosomal part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044815 | DNA packaging complex | IEP | Predicted GO |
BP | GO:0045229 | external encapsulating structure organization | IEP | Predicted GO |
BP | GO:0045926 | negative regulation of growth | IEP | Predicted GO |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Predicted GO |
MF | GO:0060089 | molecular transducer activity | IEP | Predicted GO |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | Predicted GO |
BP | GO:0071555 | cell wall organization | IEP | Predicted GO |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 108 | 151 |
No external refs found! |