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  5. MA_175978g0010

MA_175978g0010


Description : (at2g36830 : 337.0) Encodes a tonoplast intrinsic protein, which functions as water channel. It has also been shown to be able to facilitate the transport of urea and hydrogen peroxide. Highly expressed in vascular tissues of the root, stem, cauline leaves and flowers but not in the apical meristems.; gamma tonoplast intrinsic protein (GAMMA-TIP); FUNCTIONS IN: water channel activity, urea transmembrane transporter activity; INVOLVED IN: in 6 processes; LOCATED IN: in 7 components; EXPRESSED IN: 33 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: tonoplast intrinsic protein 2 (TAIR:AT3G26520.1); Has 11016 Blast hits to 10983 proteins in 2213 species: Archae - 82; Bacteria - 5238; Metazoa - 1501; Fungi - 451; Plants - 2489; Viruses - 0; Other Eukaryotes - 1255 (source: NCBI BLink). & (p50156|tip11_orysa : 324.0) Probable aquaporin TIP1.1 (Tonoplast intrinsic protein 1.1) (OsTIP1.1) (rTIP1) - Oryza sativa (Rice) & (reliability: 674.0) & (original description: no original description)


Gene families : OG_42_0000183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_175978g0010
Cluster HCCA clusters: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
165030 No alias tonoplast intrinsic protein 2;3 0.02 Orthogroups_2024-Update
A4A49_42579 No alias putative aquaporin tip3-2 0.03 Orthogroups_2024-Update
Bradi2g07830 No alias tonoplast intrinsic protein 4;1 0.03 Orthogroups_2024-Update
Brara.K01694.1 No alias tonoplast intrinsic protein *(TIP) 0.03 Orthogroups_2024-Update
Glyma.13G333100 No alias tonoplast intrinsic protein 1;3 0.03 Orthogroups_2024-Update
HORVU7Hr1G081770.1 No alias tonoplast intrinsic protein *(TIP) 0.04 Orthogroups_2024-Update
Mp6g11740.1 No alias tonoplast intrinsic protein (TIP) 0.02 Orthogroups_2024-Update
Mp6g11790.1 No alias tonoplast intrinsic protein (TIP) 0.02 Orthogroups_2024-Update
PSME_00031678-RA No alias (at3g16240 : 364.0) Delta tonoplast intrinsic protein,... 0.03 Orthogroups_2024-Update
PSME_00033210-RA No alias (at3g16240 : 295.0) Delta tonoplast intrinsic protein,... 0.03 Orthogroups_2024-Update
Potri.018G152100 No alias Aquaporin-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s101_226V6 No alias mip tip subfamily 0.03 Orthogroups_2024-Update
Seita.4G160700.1 No alias tonoplast intrinsic protein *(TIP) 0.05 Orthogroups_2024-Update
Seita.5G007500.1 No alias tonoplast intrinsic protein *(TIP) 0.02 Orthogroups_2024-Update
Seita.9G541300.1 No alias tonoplast intrinsic protein *(TIP) 0.04 Orthogroups_2024-Update
Sobic.001G505100.1 No alias tonoplast intrinsic protein *(TIP) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 14 234
No external refs found!