Description : (at5g62940 : 138.0) HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.; HIGH CAMBIAL ACTIVITY2 (HCA2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1915 Blast hits to 1778 proteins in 135 species: Archae - 0; Bacteria - 49; Metazoa - 135; Fungi - 61; Plants - 1116; Viruses - 0; Other Eukaryotes - 554 (source: NCBI BLink). & (o24463|pbf_maize : 132.0) Dof zinc finger protein PBF (Prolamin box-binding factor) - Zea mays (Maize) & (reliability: 276.0) & (original description: no original description)
Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Picea release: MA_17614g0010 | |
Cluster | HCCA clusters: Cluster_75 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi3g56380 | No alias | OBF binding protein 4 | 0.04 | Orthogroups_2024-Update | |
Brara.F02115.1 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
Glyma.02G062700 | No alias | OBF binding protein 1 | 0.03 | Orthogroups_2024-Update | |
Glyma.19G023200 | No alias | cycling DOF factor 2 | 0.02 | Orthogroups_2024-Update | |
MA_123810g0010 | No alias | (at5g60850 : 129.0) Encodes a zinc finger protein.; OBF... | 0.03 | Orthogroups_2024-Update | |
PSME_00028077-RA | No alias | (at5g39660 : 211.0) Dof-type zinc finger... | 0.03 | Orthogroups_2024-Update | |
PSME_00041316-RA | No alias | (at5g39660 : 139.0) Dof-type zinc finger... | 0.03 | Orthogroups_2024-Update | |
Potri.016G069300 | No alias | Dof-type zinc finger DNA-binding family protein | 0.03 | Orthogroups_2024-Update | |
Pp1s37_7V6 | No alias | zinc finger | 0.02 | Orthogroups_2024-Update | |
Seita.2G326900.1 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
Sobic.002G236600.2 | No alias | transcription factor *(DOF) | 0.03 | Orthogroups_2024-Update | |
Sobic.003G301700.1 | No alias | transcription factor *(DOF) | 0.05 | Orthogroups_2024-Update | |
Solyc04g070960 | No alias | Dof zinc finger protein (AHRD V3.3 *-* W9S6D3_9ROSA) | 0.03 | Orthogroups_2024-Update | |
Sopen02g032780 | No alias | Dof domain, zinc finger | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | Predicted GO |
MF | GO:0005094 | Rho GDP-dissociation inhibitor activity | IEP | Predicted GO |
MF | GO:0005506 | iron ion binding | IEP | Predicted GO |
BP | GO:0006508 | proteolysis | IEP | Predicted GO |
BP | GO:0008152 | metabolic process | IEP | Predicted GO |
MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
MF | GO:0008236 | serine-type peptidase activity | IEP | Predicted GO |
MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Predicted GO |
MF | GO:0016757 | transferase activity, transferring glycosyl groups | IEP | Predicted GO |
MF | GO:0016758 | transferase activity, transferring hexosyl groups | IEP | Predicted GO |
MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
MF | GO:0017171 | serine hydrolase activity | IEP | Predicted GO |
MF | GO:0020037 | heme binding | IEP | Predicted GO |
MF | GO:0030695 | GTPase regulator activity | IEP | Predicted GO |
CC | GO:0043190 | ATP-binding cassette (ABC) transporter complex | IEP | Predicted GO |
CC | GO:0044459 | plasma membrane part | IEP | Predicted GO |
MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
BP | GO:0050790 | regulation of catalytic activity | IEP | Predicted GO |
BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Predicted GO |
BP | GO:0065009 | regulation of molecular function | IEP | Predicted GO |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
CC | GO:0098533 | ATPase dependent transmembrane transport complex | IEP | Predicted GO |
CC | GO:0098797 | plasma membrane protein complex | IEP | Predicted GO |
CC | GO:1902495 | transmembrane transporter complex | IEP | Predicted GO |
CC | GO:1904949 | ATPase complex | IEP | Predicted GO |
CC | GO:1990351 | transporter complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003851 | Znf_Dof | 41 | 97 |
No external refs found! |