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Description : (at2g17525 : 377.0) Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G74580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (q76c99|rf1_orysa : 250.0) Rf1 protein, mitochondrial precursor (PPR protein) (Fertility restorer) (Restorer for CMS) - Oryza sativa (Rice) & (reliability: 754.0) & (original description: no original description)
Gene families : OG_42_0010570 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010570_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Picea release: MA_17644g0010 | |
| Cluster | HCCA clusters: Cluster_7 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sopen09g024760 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
| MF | GO:0043167 | ion binding | IEP | Predicted GO |
| MF | GO:0043169 | cation binding | IEP | Predicted GO |
| MF | GO:0046872 | metal ion binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 163 | 208 |
| IPR002885 | Pentatricopeptide_repeat | 429 | 477 |
| IPR002885 | Pentatricopeptide_repeat | 498 | 547 |
| IPR002885 | Pentatricopeptide_repeat | 323 | 371 |
| IPR002885 | Pentatricopeptide_repeat | 230 | 267 |
| IPR002885 | Pentatricopeptide_repeat | 389 | 421 |
| IPR002885 | Pentatricopeptide_repeat | 284 | 316 |
| IPR002885 | Pentatricopeptide_repeat | 92 | 119 |
| IPR002885 | Pentatricopeptide_repeat | 130 | 158 |
| No external refs found! |