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  5. MA_178046g0010

MA_178046g0010


Description : (at5g64950 : 104.0) Mitochondrial transcription termination factor family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription termination factor-related (InterPro:IPR003690); BEST Arabidopsis thaliana protein match is: Mitochondrial transcription termination factor family protein (TAIR:AT5G07900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 208.0) & (original description: no original description)


Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_178046g0010
Cluster HCCA clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
At5g64950 No alias Emb [Source:UniProtKB/TrEMBL;Acc:Q9LV83] 0.06 Orthogroups_2024-Update
Bradi1g45338 No alias Mitochondrial transcription termination factor family protein 0.02 Orthogroups_2024-Update
Glyma.13G216701 No alias Mitochondrial transcription termination factor family protein 0.05 Orthogroups_2024-Update
Glyma.16G085500 No alias Mitochondrial transcription termination factor family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G024310.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
HORVU2Hr1G116050.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
HORVU6Hr1G075340.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
LOC_Os05g34160 No alias mTERF domain containing protein, expressed 0.03 Orthogroups_2024-Update
PSME_00006887-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00056620-RA No alias (at1g79220 : 139.0) Mitochondrial transcription... 0.04 Orthogroups_2024-Update
Seita.4G092000.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
Seita.4G094400.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
Seita.4G095000.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G179800.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.009G133400.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
Solyc11g022600 No alias Mitochondrial transcription termination factor-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO