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  5. MA_18317g0010

MA_18317g0010


Description : (at5g20250 : 863.0) encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.; DARK INDUCIBLE 10 (DIN10); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Raffinose synthase (InterPro:IPR008811); BEST Arabidopsis thaliana protein match is: seed imbibition 2 (TAIR:AT3G57520.1). & (q93xk2|stsyn_pea : 281.0) Stachyose synthase precursor (EC 2.4.1.67) (Galactinol--raffinose galactosyltransferase) - Pisum sativum (Garden pea) & (reliability: 1726.0) & (original description: no original description)


Gene families : OG_42_0000676 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Picea release: MA_18317g0010
Cluster HCCA clusters: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
At5g20250 No alias Raffinose synthase family protein... 0.02 Orthogroups_2024-Update
HORVU3Hr1G020780.5 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G027930.7 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00005581-RA No alias (at3g57520 : 782.0) seed imbibition 2 (SIP2); CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00021707-RA No alias (at1g55740 : 630.0) seed imbibition 1 (SIP1); CONTAINS... 0.04 Orthogroups_2024-Update
PSME_00049278-RA No alias (at5g40390 : 807.0) Encodes a protein which might be... 0.03 Orthogroups_2024-Update
Sobic.010G057300.1 No alias galactinol-sucrose galactosyltransferase 0.03 Orthogroups_2024-Update
Sopen02g031260 No alias Raffinose synthase or seed imbibition protein Sip1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0004107 chorismate synthase activity IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0006897 endocytosis IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0098657 import into cell IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 1 686
No external refs found!