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  5. Solyc10g050750

Solyc10g050750


Description : disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 --* AT5G17680.2)


Gene families : OG_42_0000252 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc10g050750
Cluster HCCA clusters: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
A4A49_36028 No alias pectin acetylesterase 8 0.03 Orthogroups_2024-Update
LOC_Os01g66850 No alias pectinacetylesterase domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.012G142300 No alias Pectinacetylesterase family protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!